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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015887291.1_cds_XP_016441628.1_36971
CDS Infomation

[gene=LOC107767220] [db_xref=GeneID:107767220] [protein=putative lipase ROG1 isoform X3] [protein_id=XP_016441628.1] [location=join(199565..199580,199869..199931,200545..200615,201116..201385,202901..203061,203127..203182,203390..203442,203513..203642,204097..204194,204877..204948)] [gbkey=CDS]
Sequence

ATGGCCTTATTGGCAGACGATTGGAAATATGCTGCAAAGCAATTTGTCAAGGCCTATTCA
CGCGATGTCATTGTTCATTGCAGTGACTCTAATTGTTCGACGTTGACATTCGATGGTGTT
GATATAATGGGGACAAGGCTAGCTGAAGAGGTATTATCTGTTATAAAGCAGCATCCACAT
CTACAGAAGATTTCTTTTGTTTGTCACTCCCTGGGTGGCCTGGTATGTAGATATGCAATT
GCGAAGCTATATGAACAAGGATCTGCAAGAAGAGCTTGTGGAGAAGAGATGGAATGTAGC
CTTAATGGTTCCGCTGATTCGTGTGTGGAAGAGGTATCGAAAAGAAAAATTGCAGGGTTG
GAACCTGTGAACTTTATAACCTGTGCAACACCACATCTCGGTTGTAGGGGTCACAAACAG
GCTCCAGCATTCTGTGGGTTATACTCACTTGAAAAAGTTGCATCGAGTTCCTCATGGTTA
CTTGGAAGAAGTGGAAGGCATCTCTTTTTGAAAGATTGTGATGAAGGGAAACCTCCTCTT
CTTCTTCGAATGGCCAGTGATTCTGAAGATCTGCCATTTATATCCGCTTTGCAGTCATTT
AAGCGTCGTGTGGCCTACGCAAATACAAGTTTTGACTATCTTGTTGGGTGGAGTACATCA
TCTTTGCGGCGCAGAAATGAGCTTCCAAAGTGTCGAAACTTGAAAAAAGGGGATAAATAC
CCACATATTGTAAATGTAGATGAGCCAACAAGTGTTAGTAATCAAGAAGAAACACCTACT
GAGGCCAAAATAAATGGACGCAAGTCTAACGAAATGGAAGAGGCTATGATCAGAGGTTTA
ACAAAGTTGAGCTGGGAACGAGTTGATGTTAGCTTCAAAGGAAGTAAACAAAGATACTTT
GCACACACAACAATTCAGGTAACGAATTATTGCTTTAATTCTGATGGAGCAGATGTTATA
CAGCACATGATCGACAATTTTGCTGTATAG

Peptide Sequence

PEP ID

XP_016441628.1
PEP Infomation

PREDICTED: putative lipase ROG1 isoform X3 [Nicotiana tabacum]
Sequence

MALLADDWKYAAKQFVKAYSRDVIVHCSDSNCSTLTFDGVDIMGTRLAEEVLSVIKQHPH
LQKISFVCHSLGGLVCRYAIAKLYEQGSARRACGEEMECSLNGSADSCVEEVSKRKIAGL
EPVNFITCATPHLGCRGHKQAPAFCGLYSLEKVASSSSWLLGRSGRHLFLKDCDEGKPPL
LLRMASDSEDLPFISALQSFKRRVAYANTSFDYLVGWSTSSLRRRNELPKCRNLKKGDKY
PHIVNVDEPTSVSNQEETPTEAKINGRKSNEMEEAMIRGLTKLSWERVDVSFKGSKQRYF
AHTTIQVTNYCFNSDGADVIQHMIDNFAV

Transcript Sequence

Gene sequence data has not been registered.